Job Description P52045 Confidence 96.88% Date Thu Jan 5 12:04:59 GMT 2012 Rank 116 Aligned Residues 171 % Identity 15% Template c1uytC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acetyl-coa carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain Resolution 2.5 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																												.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	I	E	F	N	Y	G	R	K	L	N	A	L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	A	G	H
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	V	V	A	N	D	I	T	F	K	I	G	S	F	G	P	Q	E	D	E	F	F	N	K	V	T	E	Y	A	R	K	R	G	I	P	R	I	Y	L	A	A	N	S	G	A	R	I	G	M	A	E	E	I	V	P	L	F	Q	V	A	W	N	D	A	A	N	P	D	K	G	F	Q	Y	L	Y	L	T	S	E
Template Known Secondary structure									T	T	S	G	G	G		B																			T											S	B						S	T	T	S	T	T		B					S		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1582	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.
		67	.	.	70	.	.																																.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	H	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	R	D	P	L	S	Y	D	D	P	L	R	Q	I	T	R	M	I	Q	K	F	P	K	P	I	I	S	M	V	E	G	S	V	W	G	G	A	F	E	M	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																													.
Template Sequence		G	M	E	T	L	K	K	F	D	K	E	N	S	V	L	T	E	R	T	V	I	N	G	E	E	R	F	V	I	K	T	I	I	G	S	E	D	G	L	G	V	E	C	L	R	G	S	G	L	I	A	G	A	T	S	R	A	Y	H	.	D	I	F	T	I	T	L	V	T	C	R	S	V	G	I	G	A	Y	L	V
Template Known Secondary structure					T	G	G	G	T	T	T	T	T	T					B			S	S	S	S						S					S	S	S		S	S																				.		S								S				T
Template Predicted Secondary structure																																																													.
Template SS confidence
		1662	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720		.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		M	S	S	D	L	I	I	A	A	S	T	S	T	F	S	M	T	P	V	N	L	G	V	P	Y	N	L	V	G	I	H	N	L	T	R	D	A	G	F	H	I	.	V	K	E	L	I	F	T	A	S	P	I	T	A	Q	R	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E	L	E	D	F	T	L	Q	M
Query Conservation																																											.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.																		.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																		.	.	.
Template Sequence		R	L	G	Q	R	A	I	Q	V	E	G	Q	P	I	I	L	T	.	.	.	.	.	.	.	.	.	.	.	G	A	P	A	I	N	K	M	L	G	R	E	V	Y	T	S	N	L	Q	L	G	G	.	.	.	.	T	Q	I	M	Y	N	N	G	V	S	H	L	T	A	V	D	D	.	.	.	L	A	G	V	E	K
Template Known Secondary structure				T							T	T					S	S	.	.	.	.	.	.	.	.	.	.	.										T	S						T					S	.	.	.	.								T	S		S				S	S		.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																		.	.	.
Template SS confidence
		1741	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.												.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.					1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.				.	.	.	1800	.	.
		195	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	H	I	S	E	K	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	W	M	S	Y	V	P
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		1803	.	.	.	.	.	.	1810	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions