Job Description P0ACC1 Confidence 97.82% Date Wed Jan 25 15:20:23 GMT 2012 Rank 305 Aligned Residues 156 % Identity 15% Template c3swrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin Resolution 2.49 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160													.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	.	.	.	.	.	.	.	.	.	.	.	.	I	H	I	L	Q	S	D	W	F	S	A	L	A
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	L	P	K	L	R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	D	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	N	P	G	S	T	V	F	T	E	D	C	N	I	L	L	K	L	V	M	A	G	E	T	T	N	S	R	G	Q	R	L	P	Q
Template Known Secondary structure													S		T	T	S										T	S									S	S												T	T	S					S												T		S	B		T	T			B
Template Predicted Secondary structure
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H	.	.	.	.	.	.	.	.	G	W	Q	Q	G	E	A
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.											.					.							.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.											.					.
Template Sequence		K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	.	.	.	.	.	.	.	.	.	V	V	S	F	L	S	Y	C	D	Y	.	Y	R	P	R	.	F	F	L	L	E	N	V	R	N	F	V	S	F	K	R	S	M	V	L	K	L
Template Known Secondary structure		T	T	T		S									T	T			S	S	S											T	T	S		.	.	.	.	.	.	.	.	.											.				S	.								G	G	G	G	T	T	G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.											.					.
Template SS confidence
		1214	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.										.	.	1250	.	.	.	.	.	.	.		.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.	.	.	.	.	270	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		V	R	Q	A	F	I	L	A	G	Y	H	D	V	E	T	C	R	D	Y	.	.	.	.	.	.	G	D	N	E	R	V	T	L
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	R	C	L	V	R	M	G	Y	Q	C	T	F	G	V	L	Q	A	G	Q	Y	G	V	A	Q	T	R	R	R	A	I	I
Template Known Secondary structure										T										G	G	G	G	T		S	B
Template Predicted Secondary structure
Template SS confidence
		1283	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions