Job Description P0ACC1 Confidence 99.43% Date Wed Jan 25 15:20:23 GMT 2012 Rank 206 Aligned Residues 223 % Identity 14% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		A	F	G	E	T	Q	L	T	D	E	Q	C	Q	Q	L	D	A	L	L	T	R	R	R	D	G	E	P	I	A	H	L	T	G	V	R	E	F	W	S	L	P	L	F	V	S	P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	A	L	A	R	L	P	E	Q	P	.	.	.	C	R	I	L	D	L	G
Query Conservation																																																																								.	.	.
Alig confidence																																										.	.																													.	.	.
Template Conservation																																										.	.
Template Sequence		T	N	D	N	D	I	W	N	V	N	L	L	S	S	L	N	D	L	G	R	R	I	L	T	G	D	E	L	A	E	L	I	H	D	I	A	T	R	G	R	.	.	G	H	E	G	V	V	P	T	D	I	E	L	G	K	V	L	S	I	I	S	Q	H	I	L	G	R	P	L	T	E	D	E	V	I	S	D	P	A
Template Known Secondary structure		T	T		T	T	T																		S	S												T	T	S		.	.				B	S	S	S																			S				T	T						T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	.	.	.	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	.	.	.	.	.	.	.	.	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y
Query Conservation																	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T	I	T	G	E	D	V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y
Template Known Secondary structure			T	T	S									T	S	T	T			G	G	G						S		G	G	G										T	T	S	T	T	T		B	T	T	B									G	G	G			G	G	G	G	T	T									B
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.			.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																			.	.	.	.	.					.	.
Query SS confidence																							.	.	.	.																																			.	.	.	.	.					.	.
Query Sequence		I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	.	.	.	.	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H	G	W	Q	.	.	.	.	.	Q	G	E	A	.	.	V	R	Q	A	F	I	L	A	G	Y
Query Conservation																							.	.	.	.																																			.	.	.	.	.					.	.
Alig confidence																							.	.	.	.																																			.	.	.	.	.					.	.									.
Template Conservation																																																																																.
Template Sequence		V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A	I	X	P	K	Q	Y	L	T	A	Q	G	N	E	S	K	A	F	R	E	F	L	V	G	N	.	F
Template Known Secondary structure			S	S																			S	S			S	S		S	S	S															S		T	T									T							S											T	T	T	.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.
		256	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	V	E	T	C	R	D	Y	G	D	N
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		G	L	E	H	I	F	.	L	Y	P	R	E
Template Known Secondary structure								.				B
Template Predicted Secondary structure								.
Template SS confidence
		489	490	.	.	.	.		.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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