Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACC1
Confidence97.52%DateWed Jan 25 15:20:23 GMT 2012
Rank319Aligned Residues169
% Identity15%Templatec3pvcA_
PDB info PDB header:oxidoreductase, transferaseChain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130. ........140 .........150. .....
Predicted Secondary structure 











............


...

.........
Query SS confidence 






























. . . . . . . . . . . .








. . .










. . . . . . . . .




Query Sequence  QALARLPEQPCRILDLGTGTGAIALALASER. . . . . . . . . . . . PDCEIIAVD. . . RMPDAVSLAQR. . . . . . . . . NAQHL
Query Conservation    
         








     

   ............    
 


...

   
  
  .........
    
Alig confidence 






























............








...










.........




Template Conservation              
 
 


 
 
 
                    
   
 
  
     
                
  
Template Sequence  ARFASHPQQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRA
Template Known Secondary structure 

SS

TTS
TTSS

SS


TT
GGG
Template Predicted Secondary structure 



























Template SS confidence 















































































   50.........60.........70.........80.........90.........100.........110.........120.........
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  AIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL
Query Conservation                       
 

 


         
          

     
              
 
 
 
  
Alig confidence 




















































..
























Template Conservation         
            
 
  

    
           
   

 
 
..

  
                   
Template Sequence  QWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP. . NPDXWNEQLFNAXARXTRPGGTFST
Template Known Secondary structure  T




STTTTS
GGG

GGGTT

SS

..

TT
S
Template Predicted Secondary structure 


























..






Template SS confidence 















































































   130.........140.........150.........160.........170.........180.. .......190.........200.......
 
   237..240.........250.........260.........270.....
Predicted Secondary structure 













Query SS confidence 






































Query Sequence  EHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY
Query Conservation 
        
   
   

  
 
  
     
 
 
  
Alig confidence  ...
















.

















Template Conservation  ...      

  
   

 .
    
   

       
Template Sequence  . . . FTAAGFVRRGLQQAGFN. VTKVKGFGQKREXLTGTL
Template Known Secondary structure  ...S


TT
.
SSSS

Template Predicted Secondary structure  ...




.













Template SS confidence 






































   210.........220...... ...230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions