Job Description P0ACC1 Confidence 99.69% Date Wed Jan 25 15:20:23 GMT 2012 Rank 85 Aligned Residues 165 % Identity 19% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		P	I	A	H	L	T	G	V	R	E	F	W	S	L	P	L	F	V	S	P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	R	L	.	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		K	L	E	E	I	I	G	R	N	F	G	E	A	I	K	S	H	K	G	H	E	F	K	I	L	R	P	R	I	V	D	Y	L	D	K	M	K	R	G	P	Q	I	V	H	P	K	D	A	A	L	I	V	A	Y	A	G	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I
Template Known Secondary structure			G	G	G	G	T	T			T	T						T	T																		S				S															T	T			T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																													.
Query SS confidence		.																													.
Query Sequence		.	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	.	K	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V
Query Conservation		.																													.
Alig confidence		.																													.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	P	E	G	R	V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	D	I	Y	E	G	I	E	E	E	N	V	D	H	V	I	L	D	L	P	Q	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S							S																T		T	T	T						S		G	G	G						S								S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.
Predicted Secondary structure																																		.															.	.
Query SS confidence																																		.															.	.
Query Sequence		A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H	G	W	.	Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	.	.	Y	H	D	V	E	T	C
Query Conservation																																		.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	V	V	E	H	A	A	K	A	L	K	P	G	G	F	F	V	A	Y	T	P	C	S	N	Q	V	M	R	L	H	E	K	L	R	E	F	K	D	Y	F	M	K	P	R	T	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	G	G																			S	S														T	G	G	G	B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions