Job Description P0ACC1 Confidence 99.53% Date Wed Jan 25 15:20:23 GMT 2012 Rank 167 Aligned Residues 206 % Identity 15% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	I	A	H	L	T	G	V	R	E	F	W	S	L	P	L	F	V	S	P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	A	L	A	R	L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	.	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A
Query Conservation																																																																		.
Alig confidence																																								.	.																									.
Template Conservation																																								.	.
Template Sequence		Q	E	G	F	Y	Y	P	E	E	A	R	P	G	P	H	P	F	F	Y	A	G	L	Y	Y	I	Q	E	P	S	A	Q	A	V	G	V	L	L	D	.	.	P	K	P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	H	L	A	A	R	M	G	G	K	G	L	L	L	A	N	E	V	D	G	K	R
Template Known Secondary structure									T	T				S	S	S					T	T	S						T	T	T									.	.			T	T						S	S		T	T											T	T	T		S							S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I	L	Q	S	D	W	F	S	.	A	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S
Query Conservation																											.
Alig confidence																											.																															.	.	.
Template Conservation																																																										.	.	.
Template Sequence		V	R	G	L	L	E	N	V	E	R	W	G	A	P	L	A	V	T	Q	A	P	P	R	A	L	A	E	A	F	G	T	Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	.	.	.	H	W	G	P	S	A	P	K	R	M	A	E	V	Q	K	A	L	L	A	Q	A
Template Known Secondary structure																					S											S														G	G	G	T	T	T		T	T	S	G	G	.	.	.	G			T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.																											.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																.	.	.	.																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	A	L	V	S	G	G	F	L	L	L	E	H	.	.	.	.	G	W	Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	.	Y	H	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	C	R	D	Y	G	D	N	E	R	V	T	L	G
Query Conservation																.	.	.	.																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	L	L	G	P	G	G	V	L	V	Y	S	T	C	T	F	A	P	E	E	N	E	G	V	V	A	H	F	L	K	A	H	P	E	F	R	L	E	D	A	R	L	H	P	L	F	A	P	G	V	P	E	W	G	E	G	N	P	E	L	L	K	T	A	R	L	W	P	H	R	L	E	G	E	G	H	F	L	A
Template Known Secondary structure			T	T												S				G	G	G	T												T	T									S	T	T	S					G	G	G	T	T	T		G	G	G	G	G	S					T	T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		274	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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