Job Description P0ACC1 Confidence 97.71% Date Wed Jan 25 15:20:23 GMT 2012 Rank 312 Aligned Residues 145 % Identity 21% Template c3lx6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: structure of probable cytosine-specific methyltransferase from2 shigella flexneri Resolution 2.29 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	Q	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																			.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																			.	.
Template Sequence		P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	.	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	.	.	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	Q	E	G	V	S	D	E	A	A	A	E
Template Known Secondary structure		T			S							T		T	T	T									T	T			.																	T	T	.	.	S				T	T	T					S	S	T						T	T		S	S
Template Predicted Secondary structure																													.																			.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
										177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	.	.	.	.	.	.	.	.	H	G	W
Query Conservation		.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.						.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	.	X	F	V	L	E	N	V	K	N	L	K	S	H	D	K	G
Template Known Secondary structure							S				S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			G	G	G	T	T	S															S	.								G	G	G	G	T	G	G	G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.															.	.	.	270	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	Y	H	D	V	E	T	C	R	D	Y	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	R	V	T	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	F	R	I	I	X	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L
Template Known Secondary structure															T				T	T	S	S			S	S	S		T	T				G	G	G	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions