Job Description P0ACC1 Confidence 98.04% Date Wed Jan 25 15:20:23 GMT 2012 Rank 295 Aligned Residues 154 % Identity 18% Template c3htxA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure of small rna methyltransferase hen1 Resolution 3.10 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																									.																										.
Query SS confidence																									.																										.
Query Sequence		P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	A	L	A	R	L	P	E	.	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	.	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I
Query Conservation																									.																										.
Alig confidence																									.																										.
Template Conservation
Template Sequence		E	A	A	F	F	K	P	P	L	S	K	Q	R	V	E	Y	A	L	K	H	I	R	E	S	S	A	S	T	L	V	D	F	G	C	G	S	G	S	L	L	D	S	L	L	D	Y	P	T	S	L	Q	T	I	I	G	V	D	I	S	P	K	G	L	A	R	A	A	K	M	L	H	V	K	L	N	K	E	A	C	N
Template Known Secondary structure						S	S	S																	S			S						T		S	S	S							T	S	S												S																T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		L	Q	S	D	W	F	S	A	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	.	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H	G	W	Q	Q
Query Conservation																										.
Alig confidence																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		V	K	S	A	T	L	Y	D	G	S	I	L	E	F	D	S	R	L	H	D	V	D	I	G	T	C	L	E	V	I	E	H	M	E	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	C	E	F	G	E	K	V	L	S	L	F	H	P	K	.	L	L	I	V	S	T	P	N	Y	E
Template Known Secondary structure			S							S		T	T	S			T	T	S		S								S		G	G	G	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T			S	.								B	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		769	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.																		.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820		.	.	.	.	.	.	.	.	.	830
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	V	R	Q	A	F	I	L	A	G	Y	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	T	I	L	Q	R	S	Q	L	P	K	F	R	N
Template Known Secondary structure		G					T					S	S		S
Template Predicted Secondary structure
Template SS confidence
		831	.	.	.	.	.	.	.	.	840	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions