Job Description P0ACC1 Confidence 97.72% Date Wed Jan 25 15:20:23 GMT 2012 Rank 310 Aligned Residues 129 % Identity 16% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		L	V	E	Q	A	L	A	R	L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	.	.	.	.	.	.	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I	L	Q	S	D	W	F	S	A
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		L	R	W	F	H	E	R	G	Y	V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	.	.	.	.	.	.	.	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	D	I	H	R
Template Known Secondary structure								T	T	S	S										T		T	T									T	S	T	T												T	T							.	.	.	.	.	.	.			B	T	T	G	G	G						S			T	T	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	.	V	S	G	G	F	L	L	L	E	H	G	W	Q	Q	G	E	A	V	R	Q	A	F
Query Conservation																																																											.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	P	V	K	C	D	T	L	L	C	D	I	G	E	S	S	S	S	S	V	T	E	G	E	R	T	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	V	L	A	P	Y	M	P	D	V	L	E	K	L
Template Known Secondary structure		S						S											S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			S							S		T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		251	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions