Job Description P0ACC1 Confidence 99.75% Date Wed Jan 25 15:20:23 GMT 2012 Rank 37 Aligned Residues 162 % Identity 21% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		V	R	E	F	W	S	L	P	L	F	V	S	P	A	T	L	.	.	I	P	R	P	D	T	E	C	L	V	E	Q	A	L	A	R	L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R
Query Conservation																		.	.
Alig confidence																		.	.																			.																							.
Template Conservation																																						.																							.
Template Sequence		P	I	E	E	H	G	X	K	L	L	V	D	I	Q	H	G	H	K	T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	.	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	.	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q
Template Known Secondary structure						T	T							T	T	T	S	S	T	T	S	S		G	G	G												.	T	T							T		T	T	T									T	.	T		S							S
Template Predicted Secondary structure																																						.																							.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		152	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure									.	.																	.	.	.	.	.
Query SS confidence									.	.																	.	.	.	.	.
Query Sequence		N	A	Q	H	L	A	I	.	.	K	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	.	.	.	.	.	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S
Query Conservation									.	.																	.	.	.	.	.
Alig confidence									.	.																	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Y	K	D	I	N	X	L	A
Template Known Secondary structure						T	T			G	G	G						S												T	T											S	S		S	S	T	T		S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																	.	.	.	.	320	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	N	A	L	V	S	G	G	F	L	L	L	.	.	E	H	G	W	Q	Q	G	E	A	V	R	Q	A	F	I	L	A
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D	L	F	Q	K	I	I	A	D	A
Template Known Secondary structure				T														T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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