Job Description P0ACC1 Confidence 99.73% Date Wed Jan 25 15:20:23 GMT 2012 Rank 48 Aligned Residues 165 % Identity 18% Template c2pwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase Resolution 1.70 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		P	I	A	H	L	T	G	V	R	E	F	W	S	L	P	L	F	V	S	P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	R	L	.	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		P	H	E	A	L	L	E	A	G	P	G	G	V	V	R	T	H	L	G	E	E	L	S	V	H	R	P	T	L	E	E	Y	L	L	H	M	K	R	S	A	T	P	T	Y	P	K	D	A	S	A	M	V	T	L	L	D	L	A	P	G	M	R	V	L	E	A	G	T	G	S	G	G	L	T	L	F	L	A	R	A
Template Known Secondary structure											T	T						T	T																		S			S	S															T	T			T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		131		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure			.																																									.	.
Query SS confidence			.																																									.	.
Query Sequence		R	.	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I	L	Q	S	D	W	F	S	A	.	.	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L
Query Conservation			.																																									.	.
Alig confidence			.																																									.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	E	K	G	L	V	E	S	Y	E	A	R	P	H	H	L	A	Q	A	E	R	N	V	R	A	F	W	Q	V	E	N	V	R	F	H	L	G	K	L	E	E	A	E	L	E	E	A	A	Y	D	G	V	A	L	D	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T	S							S																										S		G	G	G					T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H	G	W	.	Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	Y	H	D	V	E	T	C
Query Conservation																																			.
Alig confidence		.	.	.	.	.	.	.	.																										.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	P	W	K	V	L	E	K	A	A	L	A	L	K	P	D	R	F	L	V	A	Y	L	P	N	I	T	Q	V	L	E	L	V	R	A	A	E	A	H	P	F	R	L	E	R	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.		G	G	G	G																			S												G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions