Job Description P0ACC1 Confidence 99.85% Date Wed Jan 25 15:20:23 GMT 2012 Rank 11 Aligned Residues 168 % Identity 20% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	L	F	V	S	P	A	T	L	I	P	R	P	D	T	E	C	L	V	E	Q	A	L	A	R	L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V
Template Known Secondary structure		T							T	T		T	T	S	S	S												S		T	T			S	B			B	T	T		T	T	S											T	T		B						S	B														T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	Q	Q	F	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	H
Query Conservation
Alig confidence		.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	E	G	E	V	F	A	S	N	V	F	S	.	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A
Template Known Secondary structure		.								S	T	T	T	.	T			S													S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G
Template Predicted Secondary structure		.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			246	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	Y	H	D	V	E	T	C	R	D	Y	G	D	N	E	R	V	T	L	G	R
Query Conservation
Alig confidence							.	.									.										.	.	.
Template Conservation							.	.									.										.	.	.
Template Sequence		N	A	F	L	P	.	.	Y	P	D	V	L	D	E	T	.	F	G	F	H	E	V	I	A	Q	.	.	.	T	G	R	F	K	V	Y	R
Template Known Secondary structure			T	T	S	S	.	.									.		S								.	.	.		S	S
Template Predicted Secondary structure							.	.									.										.	.	.
Template SS confidence
		304	.	.	.	.			.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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