Job Description P0A8W5 Confidence 100.00% Date Thu Jan 5 11:08:51 GMT 2012 Rank 3 Aligned Residues 177 % Identity 45% Template c2aj2A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467; PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8. Resolution 3.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		N	L	Q	H	H	F	L	I	A	M	P	A	L	Q	D	P	I	F	R	R	S	V	V	Y	I	C	E	H	N	T	N	G	A	M	G	I	I	V	N	K	P	L	E	N	L	K	I	E	G	I	L	E	K	L	K	I	.	T	P	E	P	R	D	E	S	I	R	L	D	K	P	V	M	L	G	G	P	L	A	E
Query Conservation																																																										.
Alig confidence																																													.													.
Template Conservation																																													.
Template Sequence		N	L	T	N	H	F	L	V	A	X	P	S	X	K	D	P	Y	F	K	R	S	V	I	Y	I	C	E	H	N	Q	D	G	A	X	G	L	X	I	N	A	P	I	D	.	I	T	V	G	G	X	L	K	Q	V	D	I	E	P	A	Y	P	Q	S	H	Q	E	N	L	K	K	P	V	F	N	G	G	P	V	S	E
Template Known Secondary structure				T	T							T	T				T	T	S	T	T										T	T							S	S					.											T				S	S					T	T	T	T	T	S							S
Template Predicted Secondary structure																																													.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	G	F	I	L	H	T	P	P	S	N	F	A	S	S	I	R	I	S	D	N	T	V	M	T	T	S	R	D	V	L	E	T	L	G	T	D	K	Q	P	S	D	V	L	V	A	L	G	Y	A	S	W	E	K	G	Q	L	E	Q	E	I	L	D	N	A	W	L	T	A	P	A	D	L	N	I	L	F	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	G	F	I	L	H	R	P	R	D	H	Y	E	S	S	X	K	X	T	D	D	I	A	V	T	T	S	K	D	I	L	T	V	L	G	T	E	A	E	P	E	G	Y	I	V	A	L	G	Y	S	G	W	S	A	G	Q	L	E	V	E	L	T	E	N	S	W	L	T	I	E	A	D	P	E	L	I	F	N	T
Template Known Secondary structure												S			S	S					S	S	S						S	G	G	G	G	G	T	T	T	S	T	T	S		S	S												T	T							T	T	T	T													T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	A	D	R	W	R	E	A	A	K	L	I	G	V	D	I	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	H	E	K	W	Q	K	A	I	Q	K	L	G	I	S	P	A	Q
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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