Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W5
Confidence6.07%DateThu Jan 5 11:08:51 GMT 2012
Rank15Aligned Residues20
% Identity25%Templatec1byyA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:protein (sodium channel alpha-subunit); PDBTitle: sodium channel iia inactivation gate
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170....
Predicted Secondary structure 




Query SS confidence 



















Query Sequence  NILFKTPIADRWREAAKLIG
Query Conservation    

       
   
  

Alig confidence 



















Template Conservation   


















Template Sequence  QDIFMTEEQKKYYNAMKKLG
Template Known Secondary structure 

S


TS
Template Predicted Secondary structure 


Template SS confidence 



















   1486...1490.........1500.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions