 |
Job Description | P0AEM4 | Confidence | 6.58% | Date | Thu Jan 5 11:23:42 GMT 2012 |
Rank | 36 | Aligned Residues | 27 |
% Identity | 11% | Template | c3gqeA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:non-structural protein 3; |
PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus
|
Resolution | 2.30 Å |
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | N | G | E | L | K | M | D | T | G | K | I | A | D | A | L | I | N | E | A | Q | Q | D | L | Q | S | N |
Query Conservation |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | S | T | G | I | F | S | G | N | K | D | R | L | T | . |
Q | S | L | N | H | L | L | T | A | L | D | T | T |
Template Known Secondary structure |   |
T | T | S | S | T | T | S |
| S | S |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|