Job Description P36680 Confidence 5.70% Date Thu Jan 5 11:53:46 GMT 2012 Rank 50 Aligned Residues 23 % Identity 30% Template c1p65A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:nucleocapsid protein; PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv) Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.													.	.	.	.	.	.	.	140
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	L	V	R	Q	R	L	S	I	P	G	G	C	C	.	.	.	.	.	.	.	.	.	.	.	.	S	F	D	L	P	T	L	H
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	S	I	Q	T	A	F	N	Q	G	A	G	T	C	T	L	S	D	S	G	R	I	S	Y	T	V	E	F	S	L	P	T	H	H
Template Known Secondary structure												T		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions