Return to main results Retrieve Phyre Job Id

Job DescriptionP31449
Confidence87.74%DateThu Jan 5 11:47:40 GMT 2012
Rank152Aligned Residues44
% Identity9%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190.........200.........210.........220.....
Predicted Secondary structure 










Query SS confidence 












































Query Sequence  PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT
Query Conservation       
      
       


  

     
   
 
 

   
Alig confidence 















.



























Template Conservation   

 
 
 

  
   .    
  


  

   

  
 
 

 
Template Sequence  NTLKKAFEILDFIVKN. PGDVSVSEIAEKFNMSVSNAYKYMVVLE
Template Known Secondary structure  TT
.SS
B
TT

Template Predicted Secondary structure 
.







Template SS confidence 












































   2.......10....... ..20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions