Return to main results Retrieve Phyre Job Id

Job DescriptionP31449
Confidence75.79%DateThu Jan 5 11:47:40 GMT 2012
Rank307Aligned Residues39
% Identity31%Templatec3nxcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hth-type protein slma; PDBTitle: molecular mechanism by which the escherichia coli nucleoid occlusion2 factor, slma, keeps cytokinesis in check
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220..
Predicted Secondary structure 












Query SS confidence 











































Query Sequence  KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL
Query Conservation         
      
       


  

     
   
 
 

Alig confidence 














.....























Template Conservation    

  

 

    .....   
   

  



  


  
 
Template Sequence  RNRREEILQSLALML. . . . . ESITTAKLAASVGVSEAALYRHFP
Template Known Secondary structure 
TT.....


TTS
TT
S
Template Predicted Secondary structure 

.....




Template SS confidence 











































   23......30....... ..40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions