Job Description P31449 Confidence 85.92% Date Thu Jan 5 11:47:40 GMT 2012 Rank 193 Aligned Residues 145 % Identity 11% Template c3la2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:global nitrogen regulator; PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate Resolution 2.60 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.				.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																.	.							.	.	.									.	.	.	.
Query SS confidence																.	.							.	.	.									.	.	.	.
Query Sequence		V	A	V	Y	T	V	Q	G	C	G	K	I	L	L	.	.	K	N	G	E	Q	I	.	.	.	T	L	H	G	N	C	I	I	.	.	.	.	F	L	K	P	M	D	I	H	S	Y	H	C	E	G	L	V	W	E	Q	Y	W	M	E	F	T	P	T	S	M	M	D	I	P	V	G	Q	Q	S	V	I	Y	N	G
Query Conservation																.	.							.	.	.									.	.	.	.
Alig confidence																.	.							.	.	.									.	.	.	.																																		.	.
Template Conservation																																																																								.	.
Template Sequence		R	V	Y	F	L	L	K	G	A	V	K	L	S	R	V	Y	E	A	G	E	E	I	T	V	A	L	L	R	E	N	S	V	F	G	V	L	S	L	L	T	G	N	K	S	D	R	F	Y	H	A	V	A	F	T	P	V	E	L	L	S	A	P	I	E	Q	V	E	Q	A	L	.	.	K	E	N	P	E	L	S	M
Template Known Secondary structure									S									T	T	S										T	T					T					T	G	G	G	S	B								S	S	S																.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	Y	N	Q	E	L	T	E	V	A	E	L	I	T	S	P	E	A	I	K	N	N	L	A	V	A	F	L	T	K	I	I	Y	Q	W	I	C	L	M	Y	A	D	G	K	K	D	P	Q	R	R	Q	I	E	K	L	I	A	T	L	H	A	S	L	Q	Q	R	W	S	V	A	D	M	A	A	T	I	P	C	S
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	L	R	G	L	S	S	R	I	L	Q	T	E	M	M	I	E	T	L	A	H	R	D	M	G	S	R	L	V	S	F	L	L	I	L	C	R	D	F	G	V	P	C	A	D	G	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	K	L	S	H	Q	A	I	A	E	A	I	G	S	T
Template Known Secondary structure																								S	S																					S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.			S												T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.															170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	W	L	R	R	L	F	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	T	V	T	R	L	L	G	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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