Return to main results Retrieve Phyre Job Id

Job DescriptionP31449
Confidence83.82%DateThu Jan 5 11:47:40 GMT 2012
Rank230Aligned Residues45
% Identity11%Templatec3dpjB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210.........220..
Predicted Secondary structure 













Query SS confidence 












































Query Sequence  KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL
Query Conservation          
      
       


  

     
   
 
 

Alig confidence 












































Template Conservation 
  

  

 

  
    
    

  

  



  


  
 
Template Sequence  QAQTRDQIVAAADELFYRQGFAQTSFVDISAAVGISRGNFYYHFK
Template Known Secondary structure  TT
STT

T

TT
S
Template Predicted Secondary structure 











Template SS confidence 












































   3......10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions