 |
Job Description | P31449 | Confidence | 55.77% | Date | Thu Jan 5 11:47:40 GMT 2012 |
Rank | 429 | Aligned Residues | 46 |
% Identity | 11% | Template | c2xroE_ |
PDB info |
PDB header:dna-binding protein/dna | Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; |
PDBTitle: crystal structure of ttgv in complex with its dna operator
|
Resolution | 3.40 Å |
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Q | R | R | Q | I | E | K | L | I | A | T | L | H | A | S | L | Q | Q | R | W | S | V | A | D | M | A | A | T | I | P | C | S | E | A | W | L | R | R | L | F | L | R | Y | T | G | K |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   | . |   |   |   |   |
|   |
|
|
|   |   |
|
|
|   |   |
|
|
|   |
|
|
|   |
|
|   |   |   |
Template Sequence |   |
Q | V | I | A | R | A | A | S | I | M | R | A | L | G | S | H | P | . |
H | G | L | S | L | A | A | I | A | Q | L | V | G | L | P | R | S | T | V | Q | R | I | I | N | A | L | E | E | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | . | T |
| B |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|