Job Description P31449 Confidence 72.36% Date Thu Jan 5 11:47:40 GMT 2012 Rank 339 Aligned Residues 138 % Identity 9% Template c1ft9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:carbon monoxide oxidation system transcription PDBTitle: structure of the reduced (feii) co-sensing protein from r.2 rubrum Resolution 2.60 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	N	C	I	I	F	L	K	P	M	D	I	H	S	Y	H	C	E	G	L	V	W	E	Q	Y	W	M	E	F	T	P	T	S	M	M	D	I	P	V	G	Q	Q	S	V	I	Y	N	G	E	I	Y	N	Q	E	L	T	E	V	A	E	L	I	T	S	P	E	A	I	K	N	N	L	A	V	A	F	L	T	K
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		D	E	N	G	V	F	V	V	V	D	G	R	L	R	V	Y	L	V	G	E	E	R	E	I	S	L	F	Y	L	T	S	G	D	M	F	C	M	H	S	G	C	L	V	E	A	T	E	R	T	E	V	R	F	A	D	I	R	T	F	E	Q	K	L	Q	T	C	.	P	S	M	A	W	G	L	I	A	I	L	G	R
Template Known Secondary structure												S									T	T										T	T					S		S	S						S	S																				.	G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		I	I	Y	Q	W	I	C	L	M	Y	A	D	G	K	K	D	P	Q	R	R	Q	I	E	K	L	I	A	T	L	.	.	.	.	.	.	.	H	A	S	L	Q	Q	R	W	S	V	A	D	M	A	A	T	I	P	C	S	E	A	W	L	R	R	L	F	L	R
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	S	C	M	R	T	I	E	D	L	M	F	H	D	I	K	Q	R	I	A	G	F	F	I	D	H	A	N	T	T	G	R	Q	T	G	V	I	V	S	V	D	F	T	V	E	E	I	A	N	L	I	G	S	S	R	Q	T	T	S	T	A	L	N	S
Template Known Secondary structure															T														T		B				S																					S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions