Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence37.77%DateThu Jan 5 11:58:14 GMT 2012
Rank322Aligned Residues50
% Identity14%Templated2frha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........
Predicted Secondary structure 
































Query SS confidence 























































Query Sequence  EPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHK
Query Conservation      
   
   
  
      
 
   
   
           

   
 


 
Alig confidence 
































......
















Template Conservation 
   

  
  

  
        
  


  
......      

  
  

  
Template Sequence  KEFSISFEEFAVLTYISENKEKEYYLKDIINHL. . . . . . NYKQPQVVKAVKILSQE
Template Known Secondary structure  TT


T

SS......SST
Template Predicted Secondary structure 









......


Template SS confidence 























































   128.130.........140.........150.........160 .........170.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions