Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence69.92%DateThu Jan 5 11:58:14 GMT 2012
Rank207Aligned Residues46
% Identity20%Templated2cfxa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........
Predicted Secondary structure 






























Query SS confidence 





















































Query Sequence  IKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHK
Query Conservation    
   
   
  
      
 
   
   
           

   
 


 
Alig confidence 


















..









......
















Template Conservation 
 

  
  

  
  
 
.. 
  


  
......


  

  

  
   
Template Sequence  MKLDQIDLNIIEELKKDSR. . LSMRELGRKI. . . . . . KLSPPSVTERVRQLESF
Template Known Secondary structure 




S
..

......T

T
Template Predicted Secondary structure 






..

......



Template SS confidence 





















































   1........10......... 20......... 30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions