Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence53.87%DateThu Jan 5 11:58:14 GMT 2012
Rank253Aligned Residues121
% Identity12%Templated1xcfa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.. .......40.........50.........60.........70.........80.
Predicted Secondary structure 





...

































Query SS confidence 



























. . .
















































Query Sequence  IVIVEDEPVTQARLQSYFTQEGYTVSVT. . . ASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTG
Query Conservation 






      
   
   
  
  
...    


        



 
  

   
              

 

 
Alig confidence 



























...
















































Template Conservation 
    
               

                         
      
       
  

     



  
Template Sequence  VLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGFTYLLSRAAALPLNHLVAKLKEYNAAPPLQGFG
Template Known Secondary structure  TT

GGG
TT



TT



S








TT



S
Template Predicted Secondary structure 




























Template SS confidence 















































































   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   82.......90.........100.. .......110.........120.....
Predicted Secondary structure 






..........







Query SS confidence 




















. . . . . . . . . .






















Query Sequence  RSDRIDRIVGLEMGADDYVTK. . . . . . . . . . PLELRELVVRVKNLLWRIDLARQ
Query Conservation               

  

 
..........
     
   
  
         
Alig confidence 




















..........






















Template Conservation 
   
     
 



 






                     
  

 
  
Template Sequence  ISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATR
Template Known Secondary structure  S

TT
S

TT


TT
Template Predicted Secondary structure 














Template SS confidence 





















































   214.....220.........230.........240.........250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions