Job Description P38684 Confidence 72.21% Date Thu Jan 5 11:58:14 GMT 2012 Rank 196 Aligned Residues 48 % Identity 17% Template d1ttya_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution UNK

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		K	L	T	R	A	E	Y	E	M	L	V	A	F	V	.	T	N	P	G	E	I	L	S	R	E	R	L	L	R	M	L	S	A	R	R	V	E	N	P	D	L	R	T	V	D	V	L	I	R	R	L	R	H	K	L
Query Conservation																.
Alig confidence																.																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		T	L	S	P	R	E	A	M	V	L	R	M	R	Y	G	L	L	D	G	K	P	K	T	L	E	E	V	G	Q	Y	F	.	.	.	.	.	.	N	V	T	R	E	R	I	R	Q	I	E	V	K	A	L	R	K	L
Template Known Secondary structure		T	S													T	T	T	T	S	S												.	.	.	.	.	.	T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions