Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence70.07%DateThu Jan 5 11:58:14 GMT 2012
Rank206Aligned Residues121
% Identity10%Templated1qopa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.. .......40.........50.........60. ........70.....
Predicted Secondary structure 





...













......













Query SS confidence 



























. . .




























. . . . . .













Query Sequence  IVIVEDEPVTQARLQSYFTQEGYTVSVT. . . ASGAGLREIMQNQSVDLILLDINLPDENG. . . . . . LMLTRALRERSTVG
Query Conservation 






      
   
   
  
  
...    


        



 
  

   
......              
Alig confidence 



























...




























......













Template Conservation 


 


 

           

  
 

 
 
   

  
   
 



 
   
 

      
   
  

     
Template Sequence  VLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGPLHHLIEKLKEYHAAP
Template Known Secondary structure  TT

GGG
TT


TT



S
SSSS


SSS



TT


Template Predicted Secondary structure 































Template SS confidence 















































































   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   76...80.........90.........100... ......110.........120.....
Predicted Secondary structure 













..........






Query SS confidence 



























. . . . . . . . . .





















Query Sequence  IILVTGRSDRIDRIVGLEMGADDYVTKP. . . . . . . . . . LELRELVVRVKNLLWRIDLARQ
Query Conservation 

 

              

  

 

..........     
   
  
         
Alig confidence 



























..........





















Template Conservation 
 




   
 
      











                
   
  

 
  
Template Sequence  ALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAMKAASR
Template Known Secondary structure  SS

STT
S
TTT
TT
Template Predicted Secondary structure 
















Template SS confidence 



























































   208.210.........220.........230.........240.........250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions