 |
Job Description | P38684 | Confidence | 99.87% | Date | Thu Jan 5 11:58:14 GMT 2012 |
Rank | 43 | Aligned Residues | 120 |
% Identity | 22% | Template | d1p6qa_ |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | UNK |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
P | H | H | I | V | I | V | E | D | E | P | V | T | Q | A | R | L | Q | S | Y | F | T | Q | E | G | Y | . |
T | V | S | V | T | A | S | G | A | G | L | R | E | I | M | Q | N | Q | S | V | D | L | I | L | L | D | I | N | L | P | D | E | N | G | L | M | L | T | R | A | L | R | E | R | S | . |
. |
. |
T | V | G | I | I |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
K | I | K | V | L | I | V | D | D | Q | V | T | S | R | L | L | L | G | D | A | L | Q | Q | L | G | F | K | Q | I | T | A | A | G | D | G | E | Q | G | M | K | I | M | A | Q | N | P | H | H | L | V | I | S | D | F | N | M | P | K | M | D | G | L | G | L | L | Q | A | V | R | A | N | P | A | T | K | K | A | A | F | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |
|
| S | S |  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |
| S | S | S |
| S | S |
|  |  |  |  |  |  |  |  | T | T |
| T | T | S | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | T | G | R | S | D | R | I | D | R | I | V | G | L | E | M | G | A | D | D | Y | V | T | K | P | L | E | L | R | E | L | V | V | R | V | K | N | L | L | W | R | I | D |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
I | L | T | A | Q | G | D | R | A | L | V | Q | K | A | A | A | L | G | A | N | N | V | L | A | K | P | F | T | I | E | K | M | K | A | A | I | E | A | V | F | G | A | L | K |
Template Known Secondary structure |   |
 |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|