Job Description P38684 Confidence 99.69% Date Thu Jan 5 11:58:14 GMT 2012 Rank 116 Aligned Residues 94 % Identity 34% Template d1opca_ SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 1.95

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		C	Y	R	F	A	G	Y	C	L	N	V	S	R	H	T	L	E	R	D	G	E	P	I	K	L	T	R	A	E	Y	E	M	L	V	A	F	V	T	N	P	G	E	I	L	S	R	E	R	L	L	R	M	L	S	A	R	R	V	E	N	P	D	L	R	T	V	D	V	L	I	R	R	L	R	H	K	L	S	A	.
Query Conservation																																																																																	.
Alig confidence																																																													.																				.
Template Conservation																																																													.
Template Sequence		V	I	A	F	G	K	F	K	L	N	L	G	T	R	E	M	F	R	E	D	E	P	M	P	L	T	S	G	E	F	A	V	L	K	A	L	V	S	H	P	R	E	P	L	S	R	D	K	L	M	N	L	A	R	G	R	E	Y	S	.	A	M	E	R	S	I	D	V	Q	I	S	R	L	R	R	M	V	E	E	D
Template Known Secondary structure						T	T					T	T	T	T					T	T																			S	T	T															S	S	S		.	T	T	S	S															S
Template Predicted Secondary structure																																																													.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
						213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	D	L	L	V	T	Q	H	G	E	G	Y	F	L	A	A	D
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		P	A	H	P	R	Y	I	Q	T	V	W	G	L	G	Y	V	F	V	P	D
Template Known Secondary structure		T	T	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions