Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence22.77%DateThu Jan 5 11:58:14 GMT 2012
Rank413Aligned Residues58
% Identity10%Templated1o57a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain N-terminal domain of Bacillus PurR
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.........210 .........220..
Predicted Secondary structure 




























...






Query SS confidence 



















































. . .











Query Sequence  TRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKL. . . SADLLVTQHGEG
Query Conservation     
   
  
      
 
   
   
           

   
 


 

...    
 

 
 
Alig confidence 



























......

















...











Template Conservation   



 

  
   
  

 
  
   
......  








 


        
 


  


Template Sequence  SGRLVDLTNYLLTHPHELIPLTFFSERY. . . . . . ESAKSSISEDLTIIKQTFEQQGIGTLLTVPGAA
Template Known Secondary structure  TSTT

B
T......T

TTS
STT
Template Predicted Secondary structure 



......







Template SS confidence 


































































   6...10.........20.........30... ......40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions