Job Description P38684 Confidence 21.67% Date Thu Jan 5 11:58:14 GMT 2012 Rank 421 Aligned Residues 98 % Identity 11% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure																								.	.																									.	.	.	.	.																		.	.
Query SS confidence																								.	.																									.	.	.	.	.																		.	.
Query Sequence		D	E	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	T	V	S	V	.	.	T	A	S	G	A	G	L	R	E	I	M	Q	N	Q	S	V	D	L	I	L	L	D	I	N	.	.	.	.	.	L	P	D	E	N	G	L	M	L	T	R	A	L	R	E	R	S	.	.	T	V	G	I	I	L	V	T
Query Conservation																								.	.																									.	.	.	.	.																		.	.
Alig confidence																								.	.																									.	.	.	.	.																		.	.
Template Conservation
Template Sequence		P	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	E
Template Known Secondary structure																		T									T	T	T	G	G	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T		T																T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		G	R	S	D	R	I	D	R	I	V	G	L	E	M	G	A	D	.	.	.	.	D	Y	V	T	K	P	L	E	L	R
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V	Q	G	Q	L	F	G	E	P	A	P	W	G
Template Known Secondary structure					S											T		S				S	G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions