Job Description P38684 Confidence 94.97% Date Thu Jan 5 11:58:14 GMT 2012 Rank 150 Aligned Residues 55 % Identity 16% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		M	L	V	A	F	V	T	N	P	G	E	I	L	S	R	E	R	L	L	R	M	L	S	A	R	R	V	E	N	P	D	L	R	T	V	D	V	L	I	R	R	L	R	H	K	L	S	A	D	L	L	V	T	Q	H	G	E	.	.	G	Y	F	L	A	A	D
Query Conservation																																																											.	.
Alig confidence																								.	.	.	.	.	.																	.	.	.											.	.
Template Conservation																								.	.	.	.	.	.																	.	.	.
Template Sequence		S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	.	.	.	H	G	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L	D	L	A
Template Known Secondary structure								T	T	T	T	S		B										.	.	.	.	.	.	T	S		G	G	G	T										.	.	.	T	T	S	S					S	T	T							S
Template Predicted Secondary structure																								.	.	.	.	.	.																	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions