Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence99.90%DateThu Jan 5 11:58:14 GMT 2012
Rank20Aligned Residues124
% Identity22%Templatec3i5aA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60.........70... ....
Predicted Secondary structure 




.




























...



Query SS confidence 






















.
















































. . .



Query Sequence  PHHIVIVEDEPVTQARLQSYFTQ. EGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERST. . . VGII
Query Conservation     






      
   
  . 
  
  
    


        



 
  

   
            ...  

Alig confidence 






















.
















































...



Template Conservation     





       
   
       
  
  
  

  
     



 

 

 


 

   

       



Template Sequence  SAMVLLVDDQAMIGEAVRRGLAGHESIDFHFCADPHQAIAQAVQIKPTVILQDLVMPGLDGLTLVREYRSNPLTRDIPII
Template Known Secondary structure 

S
T
TT

TTS

SSS
SSS
STTTTTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   78.80.........90.........100.........110.........120.....
Predicted Secondary structure 


















Query SS confidence 















































Query Sequence  LVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQ
Query Conservation   

              

  

 

     
   
  
         
Alig confidence 















































Template Conservation   

          
   

 


 

     
                
Template Sequence  VLSTKEDPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYMTLLQ
Template Known Secondary structure  SS

TT
SS


TT
Template Predicted Secondary structure 






























Template SS confidence 















































   96...100.........110.........120.........130.........140...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions