Job Description P38684 Confidence 37.57% Date Thu Jan 5 11:58:14 GMT 2012 Rank 325 Aligned Residues 94 % Identity 16% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		P	H	H	I	V	I	V	E	D	E	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	T	V	S	V	T	.	A	S	G	A	G	L	R	E	I	M	Q	N	Q	S	V	D	L	I	L	L	D	I	N	L	P	D	E	N	G	L	M	L	T	R	A	L	R	E	R	S	T	V	G	I	I	L	V	T
Query Conservation																																	.
Alig confidence																.	.	.	.														.
Template Conservation																.	.	.	.
Template Sequence		D	I	P	L	V	V	I	E	T	S	R	T	R	V	.	.	.	.	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A
Template Known Secondary structure		T								S						.	.	.	.						T	T						S		T	T	S							T	T	G	G	G		S							S																	S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.					.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	S	D	R	I	D	R	I	V	G	L	E	M	G	A	D	D	Y	V	T
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		H	Y	.	.	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X
Template Known Secondary structure		S	S	.	.										T	T		S
Template Predicted Secondary structure				.	.
Template SS confidence
		516	.			.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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