Job Description P38684 Confidence 99.83% Date Thu Jan 5 11:58:14 GMT 2012 Rank 71 Aligned Residues 123 % Identity 20% Template c3cu5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																																														.
Query SS confidence																										.	.	.																																														.
Query Sequence		H	I	V	I	V	E	D	E	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	.	.	.	T	V	S	V	T	A	S	G	A	G	L	R	E	I	M	Q	N	Q	S	V	D	L	I	L	L	D	I	N	L	P	D	E	N	G	L	M	L	T	R	A	L	R	E	R	S	.	T	V	G	I	I	L	V
Query Conservation																										.	.	.																																														.
Alig confidence																										.	.	.																																														.
Template Conservation
Template Sequence		R	I	L	I	V	D	D	E	K	L	T	R	D	G	L	I	A	N	I	N	W	K	A	L	S	F	D	Q	I	D	Q	A	D	D	G	I	N	A	I	Q	I	A	L	K	H	P	P	N	V	L	L	T	D	V	R	M	P	R	M	D	G	I	E	L	V	D	N	I	L	K	L	Y	P	D	C	S	V	I	F	M
Template Known Secondary structure								S											T	S		T	T	T	S									S	S											S			S						S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	S	D	R	I	D	R	I	V	G	L	E	M	G	A	D	D	Y	V	T	K	P	L	E	L	R	E	L	V	V	R	V	K	N	L	L	W	R	I	D	L	A	R	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	Y	S	D	K	E	Y	L	K	A	A	I	K	F	R	A	I	R	Y	V	E	K	P	I	D	P	S	E	I	M	D	A	L	K	Q	S	I	Q	T	V	L	Q	H	Q	A	Q
Template Known Secondary structure				T	T											S	S							S	S			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions