Job Description P38684 Confidence 94.96% Date Thu Jan 5 11:58:14 GMT 2012 Rank 151 Aligned Residues 49 % Identity 27% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	K	L	T	R	A	E	Y	E	M	L	V	A	F	V	T	N	P	G	E	I	L	S	R	E	R	L	L	R	M	L	S	A	R	R	V	E	N	P	D	L	R	T	V	D	V	L	I	R	R	L	R	H	K	L	S	A	D
Query Conservation
Alig confidence																				.	.	.	.											.	.	.	.	.	.
Template Conservation																				.	.	.	.											.	.	.	.	.	.
Template Sequence		R	N	I	L	S	E	R	E	K	E	I	L	R	C	I	R	K	G	.	.	.	.	L	S	S	K	E	I	A	A	T	L	.	.	.	.	.	.	Y	I	S	V	N	T	V	N	R	H	R	Q	N	I	L	E	K	L	S	V	G
Template Known Secondary structure		T	T	S	S														T	.	.	.	.										T	.	.	.	.	.	.	T																		T		S
Template Predicted Secondary structure																				.	.	.	.											.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions