Job Description P38684 Confidence 99.90% Date Thu Jan 5 11:58:14 GMT 2012 Rank 18 Aligned Residues 121 % Identity 26% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	H	I	V	I	V	E	D	E	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	T	V	S	V	T	A	S	G	A	G	L	R	E	I	M	Q	N	Q	S	V	D	L	I	L	L	D	I	N	L	P	D	E	N	G	L	M	L	T	R	A	L	R	E	R	S	T	V	G	I	I	L	V	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	K	I	L	I	I	D	G	D	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	I	D	L	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I	R	N	V	T	T	C	P	I	V	Y	X	T	Y
Template Known Secondary structure										S															T	T								S										T				S						S			T	T																S							S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	D	R	I	D	R	I	V	G	L	E	M	G	A	D	D	Y	V	T	K	P	L	E	L	R	E	L	V	V	R	V	K	N	L	L	W	R	I	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	E	D	Q	S	I	L	N	A	L	N	S	G	G	D	D	Y	L	I	K	P	L	N	L	E	I	L	Y	A	K	V	K	A	I	L	R	R	X	N	S
Template Known Secondary structure														T	T		S					S	S																		T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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