Job Description P38684 Confidence 87.08% Date Thu Jan 5 11:58:14 GMT 2012 Rank 168 Aligned Residues 118 % Identity 10% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.																				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	H	H	I	V	I	V	E	D	E	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	T	V	S	.	V	T	A	S	G	A	G	L	R	E	I	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	S	V	D	L	I	L	L	D	I	N	L	P	D	E	N
Query Conservation																																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D
Template Known Secondary structure											S																T																					T	T	T		S														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	M	L	T	R	A	L	R	E	R	S	T	V	G	I	I	L	V	T	G	R	S	D	R	I	D	R	I	V	G	L	E	M	G	A	D	D	Y	V	T	K	P	L	E	L	R	E	L	V	V	R	V	K	N	L	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T
Template Known Secondary structure										G	G	G		S								S	S		S	S										T										S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions