Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence99.70%DateThu Jan 5 11:58:14 GMT 2012
Rank115Aligned Residues98
% Identity31%Templatec2jzyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180.........190.........200.........210
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  QDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKL
Query Conservation                             
   
   
  
      
 
   
   
           

   
 


 

Alig confidence 




























































.

















Template Conservation 
      
   

     
      
 

  
  

  
    
  

   
   

    .      
   
 


 

Template Sequence  AATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLELLLQRTGEVLPRSLISSLVWNMNF. DSDTNVIDVAVRRLRSKI
Template Known Secondary structure 



TT
TTT

TT



TTTS
B
T


S.S
STTTTT
Template Predicted Secondary structure 





















.



Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.. .......70.........80
 
   211.. ......220.........
Predicted Secondary structure 


....








Query SS confidence 


. . . .















Query Sequence  SAD. . . . LLVTQHGEGYFLAADV
Query Conservation     .... 
 

 
 

 
    
Alig confidence 


....















Template Conservation          
 

 
 

 
    
Template Sequence  DDDFEPKLIHTVRGAGYVLEIRE
Template Known Secondary structure  TTTSS




TTT
B

S
Template Predicted Secondary structure 













Template SS confidence 






















   81........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions