Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence93.54%DateThu Jan 5 11:58:14 GMT 2012
Rank156Aligned Residues41
% Identity20%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210.
Predicted Secondary structure 



























Query SS confidence 


















































Query Sequence  AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLS
Query Conservation   
   
  
      
 
   
   
           

   
 


 

 
Alig confidence 











....









......


















Template Conservation 

  

   
 
.... 
  


  
...... 

  

      
  

 
Template Sequence  RERQVLKLIDEG. . . . YTNHGISEKL. . . . . . HISIKTVETHRMNMMRKLQ
Template Known Secondary structure  TS....

ST......
S
T
Template Predicted Secondary structure 


....

......



Template SS confidence 


















































   16...20....... ..30....... ..40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions