Job Description P38684 Confidence 21.80% Date Thu Jan 5 11:58:14 GMT 2012 Rank 419 Aligned Residues 52 % Identity 23% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure												.	.	.																									.	.	.	.	.	.	.
Query SS confidence												.	.	.																									.	.	.	.	.	.	.
Query Sequence		P	H	H	I	V	I	V	E	D	E	.	.	.	P	V	T	Q	A	R	L	Q	S	Y	F	T	Q	E	G	Y	T	V	S	V	T	A	S	G	.	.	.	.	.	.	.	A	G	L	R	E	I	M	Q	N	Q	S	V	D	L	I	L	L	D
Query Conservation												.	.	.																									.	.	.	.	.	.	.
Alig confidence												.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D
Template Known Secondary structure		T										S	S																T								T	T																		T		S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions