 |
Job Description | P38684 | Confidence | 32.02% | Date | Thu Jan 5 11:58:14 GMT 2012 |
Rank | 353 | Aligned Residues | 46 |
% Identity | 20% | Template | c2cfxD_ |
PDB info |
PDB header:transcription | Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc; |
PDBTitle: structure of b.subtilis lrpc
|
Resolution | 2.4 Å |
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | L | T | R | A | E | Y | E | M | L | V | A | F | V | T | N | P | G | E | I | L | S | R | E | R | L | L | R | M | L | S | A | R | R | V | E | N | P | D | L | R | T | V | D | V | L | I | R | R | L | R | H | K |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |
| . | . |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . | . |
|   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
Template Sequence |   |
M | K | L | D | Q | I | D | L | N | I | I | E | E | L | K | K | D | S | R | . |
. |
L | S | M | R | E | L | G | R | K | I | . |
. |
. |
. |
. |
. |
K | L | S | P | P | S | V | T | E | R | V | R | Q | L | E | S | F |
Template Known Secondary structure |   |
|
|
|
| T | T |  |  |  |  |  |  |  |  | T | T |
| S |
| . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|