Job Description P38684 Confidence 60.73% Date Thu Jan 5 11:58:14 GMT 2012 Rank 227 Aligned Residues 45 % Identity 22% Template c1or7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea Resolution 2.00 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	R	A	E	Y	E	M	L	V	A	F	V	T	N	P	G	E	I	L	S	R	E	R	L	L	R	M	L	S	A	R	R	V	E	N	P	D	L	R	T	V	D	V	L	I	R	R	L	R	H	K	L
Query Conservation
Alig confidence																			.	.	.											.	.	.	.	.	.
Template Conservation																			.	.	.											.	.	.	.	.	.
Template Sequence		S	L	P	E	D	L	R	M	A	I	T	L	R	E	L	D	G	.	.	.	L	S	Y	E	E	I	A	A	I	M	.	.	.	.	.	.	D	C	P	V	G	T	V	R	S	R	I	F	R	A	R	E	A	I
Template Known Secondary structure			S													T	T		.	.	.										T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																			.	.	.											.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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