Return to main results Retrieve Phyre Job Id

Job DescriptionP38684
Confidence92.55%DateThu Jan 5 11:58:14 GMT 2012
Rank158Aligned Residues112
% Identity14%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30. ........40.........50......... 60.........70..
Predicted Secondary structure 

....





...











..












Query SS confidence 






. . . .






















. . .



























. .












Query Sequence  PHHIVIV. . . . EDEPVTQARLQSYFTQEGYTVSV. . . TASGAGLREIMQNQSVDLILLDINLPDE. . NGLMLTRALRERS
Query Conservation     



....


      
   
   
  
  ...
    


        



 
  

  .. 
           
Alig confidence 






....






















...



























..












Template Conservation   
 


 

 

 



  

   
   
  
  

  

 
  
        
 



 
           
  
   
Template Sequence  NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQG
Template Known Secondary structure  S

TT



TTS


SS

T
S

STT
Template Predicted Secondary structure 


























Template SS confidence 















































































   746...750.........760.........770.........780.........790.........800.........810.........820.....
 
   73......80. ........90.........100.........110...
Predicted Secondary structure 








....











Query SS confidence 








. . . .































Query Sequence  TVGIILVTG. . . . RSDRIDRIVGLEMGADDYVTKPLELRELVVRV
Query Conservation     

 

 ....             

  

 

     
   
Alig confidence 








....































Template Conservation      
 



                


    

  

     
Template Sequence  FTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAAL
Template Known Secondary structure 

S
STT

TTGGG
SS


S
Template Predicted Secondary structure 














Template SS confidence 












































   826...830.........840.........850.........860.........870
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions