Job Description P0A7J7 Confidence 100.00% Date Thu Jan 5 11:05:47 GMT 2012 Rank 1 Aligned Residues 139 % Identity 54% Template c3bboK_ PDB info PDB header:ribosome Chain: K: PDB Molecule:ribosomal protein l11; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome Resolution 9.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	K	V	Q	A	Y	V	K	L	Q	V	A	A	G	M	A	N	P	S	P	P	V	G	P	A	L	G	Q	Q	G	V	N	I	M	E	F	C	K	A	F	N	A	K	T	D	S	I	E	K	G	L	P	I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T	P	P	A	A	V	L	L	K
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		A	K	K	V	I	G	V	I	K	L	A	L	E	A	G	K	A	T	P	A	P	P	V	G	P	A	L	G	S	K	G	V	N	I	M	A	F	C	K	D	Y	N	A	R	T	A	D	K	P	.	G	F	V	I	P	V	E	I	T	V	F	D	D	K	S	F	T	F	I	L	K	T	P	P	A	S	V	L	L	L
Template Known Secondary structure						S	S							B	T	T	B				S	T	T	T	T	T	T	T	T	T	T	S	S		T	T	S	S								G	G	G	S		.	S	S	B									S	S	S											T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	G	I	K	S	G	S	G	K	P	N	K	D	K	V	G	K	I	S	R	A	Q	L	Q	E	I	A	Q	T	K	A	A	D	M	T	G	A	D	I	E	A	M	T	R	S	I	E	G	T	A	R	S	M	G	L	V	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	S	G	A	E	K	G	S	K	D	P	Q	M	E	K	V	G	K	I	T	I	D	Q	L	R	G	I	A	T	E	K	L	P	D	L	N	C	T	T	I	E	S	A	M	R	I	I	A	G	T	A	A	N	M	G	I	D	I	D
Template Known Secondary structure					T		S	S			S	S	T	T	T	S																	T		T	T	S			S	S													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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