Job Description P0A7J7 Confidence 100.00% Date Thu Jan 5 11:05:47 GMT 2012 Rank 2 Aligned Residues 141 % Identity 100% Template c2vhmI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l11; PDBTitle: structure of pdf binding helix in complex with the ribosome2 (part 1 of 4) Resolution 3.74 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	K	V	Q	A	Y	V	K	L	Q	V	A	A	G	M	A	N	P	S	P	P	V	G	P	A	L	G	Q	Q	G	V	N	I	M	E	F	C	K	A	F	N	A	K	T	D	S	I	E	K	G	L	P	I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T	P	P	A	A	V	L	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	K	V	Q	A	Y	V	K	L	Q	V	A	A	G	M	A	N	P	S	P	P	V	G	P	A	L	G	Q	Q	G	V	N	I	M	E	F	C	K	A	F	N	A	K	T	D	S	I	E	K	G	L	P	I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T	P	P	A	A	V	L	L	K
Template Known Secondary structure							S		B						S	S					S	S	S	S	S	T	T	T	T	T	T	T							T					T	T	T	T	T	S		S	S	S										S	S	S											S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	G	I	K	S	G	S	G	K	P	N	K	D	K	V	G	K	I	S	R	A	Q	L	Q	E	I	A	Q	T	K	A	A	D	M	T	G	A	D	I	E	A	M	T	R	S	I	E	G	T	A	R	S	M	G	L	V	V	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	G	I	K	S	G	S	G	K	P	N	K	D	K	V	G	K	I	S	R	A	Q	L	Q	E	I	A	Q	T	K	A	A	D	M	T	G	A	D	I	E	A	M	T	R	S	I	E	G	T	A	R	S	M	G	L	V	V	E	D
Template Known Secondary structure					T		S	S			S	S	B	T	T	B		S			B		S	T	T	T	T	S	T	T	T	S	S	S	S	S				S	S							T	T					S	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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