Job Description P0A7J7 Confidence 18.39% Date Thu Jan 5 11:05:47 GMT 2012 Rank 23 Aligned Residues 63 % Identity 10% Template c2jwlB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:protein tolr; PDBTitle: solution structure of periplasmic domain of tolr from h.2 influenzae with saxs data Resolution UNK

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.
Query Sequence		I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T	P	P	A	A	V	L	L	K	K	A	A	G	I	K	S	G	S	G	K	P	N	K	D	K	V	G	K	I	S	R	A	Q	L	Q	E	I	A	Q	T	K	A	A	D	M	T	G	A	.	.	.	.	.	.	.	.	.	D	I	E	A	M
Query Conservation																																																																				.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	V	I	L	E	V	A	G	I	G	K	Y	A	I	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	E	R	Q	E	G	L	T	E	E	M	V	T	Q	L	S	R	Q	E	F	D	K	D	N	N	T	L	F	L	V	G	G	A	K	E	V	P	Y	E	E
Template Known Secondary structure										S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																							T	T									T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	I	E	G	T	A	R	S	M	G	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	K	A	L	N	L	L	H	L	A	G	I	K
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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