Job Description P0A7J7 Confidence 100.00% Date Thu Jan 5 11:05:47 GMT 2012 Rank 4 Aligned Residues 141 % Identity 40% Template c2ftcG_ PDB info PDB header:ribosome Chain: G: PDB Molecule:39s ribosomal protein l11, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome Resolution 12.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	K	V	Q	A	Y	V	K	L	Q	V	A	A	G	M	A	N	P	S	P	P	V	G	P	A	L	G	Q	Q	G	V	N	I	M	E	F	C	K	A	F	N	A	K	T	D	S	I	E	K	G	L	P	I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T	P	P	A	A	V	L	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	E	V	G	G	V	I	R	A	I	V	R	A	G	L	A	M	P	G	P	P	L	G	P	V	L	G	Q	R	G	V	S	I	N	Q	F	C	K	E	F	N	E	R	T	K	D	I	K	E	G	I	P	L	P	T	K	I	L	V	K	P	D	R	T	F	E	I	K	I	G	Q	P	T	V	S	Y	F	L	K
Template Known Secondary structure				S											S	S				S	S	S	S	S	T	T	T	T	T	T	S	S							T	T							T	T	T			S	S				B						T	T	S						B			T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		K	A	A	G	I	K	S	G	S	G	K	P	N	K	D	K	V	G	K	I	S	R	A	Q	L	Q	E	I	A	Q	T	K	A	A	D	.	.	.	.	M	T	G	A	D	I	E	A	M	T	R	S	I	E	G	T	A	R	S	M	G	L	V	V	E	D
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		A	A	A	G	I	E	K	G	A	R	Q	T	G	K	E	V	A	G	L	V	T	L	K	H	V	Y	E	I	A	R	I	K	A	Q	D	E	A	F	A	L	Q	D	V	P	L	S	S	V	V	R	S	I	I	G	S	A	R	S	L	G	I	R	V	V	K
Template Known Secondary structure				S			S	S	S		S	S	T	T	T	S							T	T										S	S		S	S	S	S					T	T	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions