Return to main results Retrieve Phyre Job Id

Job DescriptionP03014
Confidence91.16%DateThu Jan 5 10:57:52 GMT 2012
Rank109Aligned Residues37
% Identity19%Templated1s7oa_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  LTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRF
Query Conservation          
  
   
 
   

  
 

 


 
  
Alig confidence 




































Template Conservation 
   

 

 
     

  


  



  

   
Template Sequence  LTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNI
Template Known Secondary structure  S
T


T

Template Predicted Secondary structure 








Template SS confidence 




































   23......30.........40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions