Return to main results Retrieve Phyre Job Id

Job DescriptionP03014
Confidence96.67%DateThu Jan 5 10:57:52 GMT 2012
Rank19Aligned Residues47
% Identity13%Templated1k78a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180
Predicted Secondary structure 

















Query SS confidence 














































Query Sequence  GRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRFP
Query Conservation 
   
            
  
   
 
   

  
 

 


 
   
Alig confidence 














































Template Conservation 

    




 
 
 


 
   
 
   




 

 
 




 
Template Sequence  GGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG
Template Known Secondary structure  S
B

TTS


TT

T

Template Predicted Secondary structure 

















Template SS confidence 














































   24.....30.........40.........50.........60.........70
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions